WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A2.11d.1 Sequence Name  K01A2.11d.1
Length (nt)  2115   Chromosome Location  II: 328564-332519
Chromosome . Primary Identifier  II Chromosome Location . Start  328564
Chromosome Location . End  332519 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A2.11d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019285 cbn-1 K01A2.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A2.11d K01A2.11d 2040   II: 328631-328728

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.11d.1 328564 332519 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38615   165   II: 328564-328728 Caenorhabditis elegans
Exon38618   196   II: 328875-329070 Caenorhabditis elegans
Exon38621   318   II: 329193-329510 Caenorhabditis elegans
Exon38625   43   II: 329939-329981 Caenorhabditis elegans
Exon38629   161   II: 330068-330228 Caenorhabditis elegans
Exon38632   93   II: 330386-330478 Caenorhabditis elegans
Exon38636   340   II: 330525-330864 Caenorhabditis elegans
Exon38641   197   II: 331184-331380 Caenorhabditis elegans
Exon38645   134   II: 331563-331696 Caenorhabditis elegans
Exon38649   178   II: 331764-331941 Caenorhabditis elegans
Exon38653   212   II: 332188-332399 Caenorhabditis elegans
Exon38658   78   II: 332442-332519 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.11d.1 328564 332519 -1

1 Sequence

Length
2115

1 Sequence Ontology Term

Identifier Name Description
transcript