WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:K01A2.11c Sequence Name  K01A2.11c
Length (nt)  2126   Chromosome Location  II: 328631-332511
Chromosome . Primary Identifier  II Chromosome Location . Start  328631
Chromosome Location . End  332511 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A2.11c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019285 cbn-1 K01A2.11 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.11c 328631 332511 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38617   98   II: 328631-328728 Caenorhabditis elegans
Exon38619   196   II: 328875-329070 Caenorhabditis elegans
Exon38622   318   II: 329193-329510 Caenorhabditis elegans
Exon38626   290   II: 329939-330228 Caenorhabditis elegans
Exon38633   93   II: 330386-330478 Caenorhabditis elegans
Exon38637   340   II: 330525-330864 Caenorhabditis elegans
Exon38642   197   II: 331184-331380 Caenorhabditis elegans
Exon38646   134   II: 331563-331696 Caenorhabditis elegans
Exon38650   178   II: 331764-331941 Caenorhabditis elegans
Exon38654   212   II: 332188-332399 Caenorhabditis elegans
Exon38655   70   II: 332442-332511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A2.11c 328631 332511 -1

1 Sequence

Length
2126

1 Sequence Ontology Term

Identifier Name Description
transcript