WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1069.2a.1 Sequence Name  D1069.2a.1
Length (nt)  733   Chromosome Location  II: 337782-339245
Chromosome . Primary Identifier  II Chromosome Location . Start  337782
Chromosome Location . End  339245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1069.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000778 cpn-2 D1069.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1069.2a D1069.2a 612   II: 337801-337851

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1069.2a.1 337782 339245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38660   70   II: 337782-337851 Caenorhabditis elegans
Exon38661   219   II: 337896-338114 Caenorhabditis elegans
Exon38662   105   II: 338191-338295 Caenorhabditis elegans
Exon38664   339   II: 338907-339245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1069.2a.1 337782 339245 1

1 Sequence

Length
733

1 Sequence Ontology Term

Identifier Name Description
transcript