WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1069.4a.1 Sequence Name  D1069.4a.1
Length (nt)  1299   Chromosome Location  II: 348173-357069
Chromosome . Primary Identifier  II Chromosome Location . Start  348173
Chromosome Location . End  357069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1069.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017038 dmsr-4 D1069.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1069.4a D1069.4a 1140   II: 348266-348422

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1069.4a.1 348173 357069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38702   250   II: 348173-348422 Caenorhabditis elegans
Exon38705   296   II: 348704-348999 Caenorhabditis elegans
Exon38708   143   II: 349355-349497 Caenorhabditis elegans
Exon38711   89   II: 349548-349636 Caenorhabditis elegans
Exon38714   167   II: 349695-349861 Caenorhabditis elegans
Exon38717   123   II: 349907-350029 Caenorhabditis elegans
Exon38720   170   II: 350423-350592 Caenorhabditis elegans
Exon38724   61   II: 357009-357069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1069.4a.1 348173 357069 -1

1 Sequence

Length
1299

1 Sequence Ontology Term

Identifier Name Description
transcript