WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24H12.5b.1 Sequence Name  C24H12.5b.1
Length (nt)  1890   Chromosome Location  II: 406141-410932
Chromosome . Primary Identifier  II Chromosome Location . Start  406141
Chromosome Location . End  410932 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24H12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016074 dnsn-1 C24H12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24H12.5b C24H12.5b 1791   II: 406227-406397

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C24H12.5b.1 406141 410932 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38803   257   II: 406141-406397 Caenorhabditis elegans
Exon38808   96   II: 406455-406550 Caenorhabditis elegans
Exon38813   193   II: 406602-406794 Caenorhabditis elegans
Exon38818   292   II: 407739-408030 Caenorhabditis elegans
Exon38826   293   II: 408983-409275 Caenorhabditis elegans
Exon38831   119   II: 409324-409442 Caenorhabditis elegans
Exon38835   270   II: 410151-410420 Caenorhabditis elegans
Exon38838   106   II: 410476-410581 Caenorhabditis elegans
Exon38839   80   II: 410625-410704 Caenorhabditis elegans
Exon38842   184   II: 410749-410932 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C24H12.5b.1 406141 410932 -1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
transcript