WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D9.6a.1 Sequence Name  W10D9.6a.1
Length (nt)  676   Chromosome Location  II: 456100-457890
Chromosome . Primary Identifier  II Chromosome Location . Start  456100
Chromosome Location . End  457890 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D9.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00185079 gvd-1 W10D9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D9.6a W10D9.6a 537   II: 456220-456357

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D9.6a.1 456100 457890 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon38940   258   II: 456100-456357 Caenorhabditis elegans
Exon38942   157   II: 456723-456879 Caenorhabditis elegans
Exon38944   118   II: 457582-457699 Caenorhabditis elegans
Exon38945   143   II: 457748-457890 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D9.6a.1 456100 457890 -1

1 Sequence

Length
676

1 Sequence Ontology Term

Identifier Name Description
transcript