WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W07E6.4 Sequence Name  W07E6.4
Length (nt)  1968   Chromosome Location  II: 484869-484974
Chromosome . Primary Identifier  II Chromosome Location . Start  484869
Chromosome Location . End  484974
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07E6.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17296 PRP-21 73.8 655 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00095757
WBRNAi00009265
WBRNAi00054952
WBRNAi00075310
WBRNAi00036360
WBRNAi00083712
WBRNAi00083607
WBRNAi00099864
WBRNAi00083801
WBRNAi00100859
WBRNAi00071115
WBRNAi00099258
WBRNAi00099662
WBRNAi00099460
WBRNAi00000213
WBRNAi00075311
WBRNAi00026513
WBRNAi00080039
WBRNAi00111871
WBRNAi00100111
WBRNAi00080127
WBRNAi00100485
WBRNAi00100298
WBRNAi00064391
WBRNAi00100672
WBRNAi00101046
WBRNAi00069370
WBRNAi00069371
WBRNAi00095883
WBRNAi00095960

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W07E6.4 484869 484974 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004188 prp-21 W07E6.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:W07E6.4 484869 484974 1
CDS:W07E6.4 485105 485393 1
CDS:W07E6.4 485480 485639 1
CDS:W07E6.4 485862 486231 1
CDS:W07E6.4 487013 487292 1
CDS:W07E6.4 487768 487952 1
CDS:W07E6.4 488418 488623 1
CDS:W07E6.4 489480 489677 1
CDS:W07E6.4 490106 490279 1

1 Sequence

Length
1968

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W07E6.4.1 W07E6.4.1 2095   II: 484866-490403