WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27A1.1.1 Sequence Name  T27A1.1.1
Length (nt)  498   Chromosome Location  II: 499942-506014
Chromosome . Primary Identifier  II Chromosome Location . Start  499942
Chromosome Location . End  506014 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005324 T27A1.1 T27A1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A1.1 T27A1.1 498   II: 499942-500013

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27A1.1.1 499942 506014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39043   72   II: 499942-500013 Caenorhabditis elegans
Exon39044   180   II: 503328-503507 Caenorhabditis elegans
Exon39045   169   II: 505696-505864 Caenorhabditis elegans
Exon39046   77   II: 505938-506014 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27A1.1.1 499942 506014 -1

1 Sequence

Length
498

1 Sequence Ontology Term

Identifier Name Description
transcript