WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27A1.5b.1 Sequence Name  T27A1.5b.1
Length (nt)  1035   Chromosome Location  II: 523486-525855
Chromosome . Primary Identifier  II Chromosome Location . Start  523486
Chromosome Location . End  525855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A1.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020837 slc-36.2 T27A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A1.5b T27A1.5b 1035   II: 523486-523825

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27A1.5b.1 523486 525855 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39062   340   II: 523486-523825 Caenorhabditis elegans
Exon39064   274   II: 524406-524679 Caenorhabditis elegans
Exon39066   106   II: 524933-525038 Caenorhabditis elegans
Exon39068   64   II: 525214-525277 Caenorhabditis elegans
Exon39069   251   II: 525605-525855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27A1.5b.1 523486 525855 1

1 Sequence

Length
1035

1 Sequence Ontology Term

Identifier Name Description
transcript