WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:T27A1.2c Sequence Name  T27A1.2c
Length (nt)  1695   Chromosome Location  II: 530848-536860
Chromosome . Primary Identifier  II Chromosome Location . Start  530848
Chromosome Location . End  536860 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A1.2c

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020834 T27A1.2 T27A1.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27A1.2c 530848 536860 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39084   212   II: 530848-531059 Caenorhabditis elegans
Exon39092   272   II: 531126-531397 Caenorhabditis elegans
Exon39097   325   II: 531686-532010 Caenorhabditis elegans
Exon39101   252   II: 532137-532388 Caenorhabditis elegans
Exon39111   634   II: 536227-536860 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27A1.2c 530848 536860 -1

1 Sequence

Length
1695

1 Sequence Ontology Term

Identifier Name Description
transcript