WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09E8.2a Sequence Name  C09E8.2a
Length (nt)  879   Chromosome Location  II: 553102-553341
Chromosome . Primary Identifier  II Chromosome Location . Start  553102
Chromosome Location . End  553341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E8.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19348 LIPS-7, isoform a 32.1 292 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040200
WBRNAi00010519
WBRNAi00028723
WBRNAi00102872

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09E8.2a 553102 553341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015645 lips-7 C09E8.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09E8.2a 553102 553341 1
CDS:C09E8.2a 553385 553512 1
CDS:C09E8.2a 554027 554154 1
CDS:C09E8.2a 554201 554303 1
CDS:C09E8.2a 554419 554698 1

1 Sequence

Length
879

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09E8.2a.1 C09E8.2a.1 1100   II: 551854-554801
Transcript:C09E8.2a.2 C09E8.2a.2 998   II: 553086-554801