WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C09E8.1b Sequence Name  C09E8.1b
Length (nt)  2897   Chromosome Location  II: 556552-563975
Chromosome . Primary Identifier  II Chromosome Location . Start  556552
Chromosome Location . End  563975 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E8.1b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015644 C09E8.1 C09E8.1 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09E8.1b 556552 563975 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39136   89   II: 556552-556640 Caenorhabditis elegans
Exon39138   119   II: 557024-557142 Caenorhabditis elegans
Exon39140   146   II: 557303-557448 Caenorhabditis elegans
Exon39142   92   II: 557502-557593 Caenorhabditis elegans
Exon39144   352   II: 558200-558551 Caenorhabditis elegans
Exon39146   132   II: 558604-558735 Caenorhabditis elegans
Exon39148   207   II: 559306-559512 Caenorhabditis elegans
Exon39150   129   II: 559559-559687 Caenorhabditis elegans
Exon39152   91   II: 560031-560121 Caenorhabditis elegans
Exon39154   137   II: 560169-560305 Caenorhabditis elegans
Exon39160   219   II: 561834-562052 Caenorhabditis elegans
Exon39162   323   II: 562538-562860 Caenorhabditis elegans
Exon39164   861   II: 563115-563975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09E8.1b 556552 563975 1

1 Sequence

Length
2897

1 Sequence Ontology Term

Identifier Name Description
transcript