WormMine: Gene WBGene00197577

• WormBase Gene ID: WBGene00197577
• Gene Name: W08F4.16
• Sequence Name: W08F4.16
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by ilc-17.1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 380

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00197577

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:W08F4.16	W08F4.16	380	II: 573555-573934

Other

0 CDSs

0 RNAi Result

14 Allele

• gk964317
• gk963801
• WBVar01988641
• WBVar01623147
• WBVar01623148
• gk870169
• gk358936
• WBVar01532606
• WBVar02017237
• gk411547
• gk131892
• gk131891
• WBVar01292131
• gk131893

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00197577
• Start: 573555
• End: 573934
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrII_573935..574126
• Length (nt): 192
• Chromosome Location: II: 573935-574126
• Organism: Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066594:ilc-17.1(syb5296)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00197577
• Start: 573555
• End: 573934
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 380

1 Sequence Ontology Term