WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W08F4.12a.1 Sequence Name  W08F4.12a.1
Length (nt)  594   Chromosome Location  II: 583020-584421
Chromosome . Primary Identifier  II Chromosome Location . Start  583020
Chromosome Location . End  584421 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W08F4.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021101 W08F4.12 W08F4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W08F4.12a W08F4.12a 246   II: 583337-583365

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W08F4.12a.1 583020 584421 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39202   346   II: 583020-583365 Caenorhabditis elegans
Exon39204   125   II: 583428-583552 Caenorhabditis elegans
Exon39213   123   II: 584299-584421 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W08F4.12a.1 583020 584421 -1

1 Sequence

Length
594

1 Sequence Ontology Term

Identifier Name Description
transcript