WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04H10.3a.1 Sequence Name  W04H10.3a.1
Length (nt)  2228   Chromosome Location  II: 595202-602120
Chromosome . Primary Identifier  II Chromosome Location . Start  595202
Chromosome Location . End  602120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003599 nhl-3 W04H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04H10.3a W04H10.3a 2097   II: 595330-595479

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04H10.3a.1 595202 602120 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39229   278   II: 595202-595479 Caenorhabditis elegans
Exon39233   97   II: 595533-595629 Caenorhabditis elegans
Exon39238   395   II: 595778-596172 Caenorhabditis elegans
Exon39241   256   II: 596734-596989 Caenorhabditis elegans
Exon39244   192   II: 597474-597665 Caenorhabditis elegans
Exon39248   269   II: 597793-598061 Caenorhabditis elegans
Exon39250   132   II: 598253-598384 Caenorhabditis elegans
Exon39252   190   II: 599911-600100 Caenorhabditis elegans
Exon39254   113   II: 600451-600563 Caenorhabditis elegans
Exon39257   117   II: 600724-600840 Caenorhabditis elegans
Exon39258   84   II: 601122-601205 Caenorhabditis elegans
Exon39259   105   II: 602016-602120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04H10.3a.1 595202 602120 -1

1 Sequence

Length
2228

1 Sequence Ontology Term

Identifier Name Description
transcript