WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04H10.3b.1 Sequence Name  W04H10.3b.1
Length (nt)  1800   Chromosome Location  II: 595330-600729
Chromosome . Primary Identifier  II Chromosome Location . Start  595330
Chromosome Location . End  600729 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04H10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003599 nhl-3 W04H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04H10.3b W04H10.3b 1800   II: 595330-595479

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04H10.3b.1 595330 600729 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39232   150   II: 595330-595479 Caenorhabditis elegans
Exon39234   97   II: 595533-595629 Caenorhabditis elegans
Exon39239   395   II: 595778-596172 Caenorhabditis elegans
Exon39242   256   II: 596734-596989 Caenorhabditis elegans
Exon39245   192   II: 597474-597665 Caenorhabditis elegans
Exon39249   269   II: 597793-598061 Caenorhabditis elegans
Exon39251   132   II: 598253-598384 Caenorhabditis elegans
Exon39253   190   II: 599911-600100 Caenorhabditis elegans
Exon39255   113   II: 600451-600563 Caenorhabditis elegans
Exon39256   6   II: 600724-600729 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04H10.3b.1 595330 600729 -1

1 Sequence

Length
1800

1 Sequence Ontology Term

Identifier Name Description
transcript