WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B8.5a.1 Sequence Name  T04B8.5a.1
Length (nt)  3045   Chromosome Location  II: 614770-624543
Chromosome . Primary Identifier  II Chromosome Location . Start  614770
Chromosome Location . End  624543 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020207 T04B8.5 T04B8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B8.5a T04B8.5a 2859   II: 614953-615043

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B8.5a.1 614770 624543 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39291   274   II: 614770-615043 Caenorhabditis elegans
Exon39294   132   II: 615278-615409 Caenorhabditis elegans
Exon39298   240   II: 615998-616237 Caenorhabditis elegans
Exon39302   654   II: 616781-617434 Caenorhabditis elegans
Exon39306   98   II: 617588-617685 Caenorhabditis elegans
Exon39310   142   II: 617737-617878 Caenorhabditis elegans
Exon39314   253   II: 618071-618323 Caenorhabditis elegans
Exon39318   362   II: 618666-619027 Caenorhabditis elegans
Exon39322   104   II: 619484-619587 Caenorhabditis elegans
Exon39326   194   II: 619637-619830 Caenorhabditis elegans
Exon39330   135   II: 620438-620572 Caenorhabditis elegans
Exon39334   135   II: 620618-620752 Caenorhabditis elegans
Exon39339   168   II: 620807-620974 Caenorhabditis elegans
Exon39343   154   II: 624390-624543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B8.5a.1 614770 624543 -1

1 Sequence

Length
3045

1 Sequence Ontology Term

Identifier Name Description
transcript