WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B8.5d.1 Sequence Name  T04B8.5d.1
Length (nt)  2643   Chromosome Location  II: 614953-620909
Chromosome . Primary Identifier  II Chromosome Location . Start  614953
Chromosome Location . End  620909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B8.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020207 T04B8.5 T04B8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B8.5d T04B8.5d 2643   II: 614953-615043

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B8.5d.1 614953 620909 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39292   91   II: 614953-615043 Caenorhabditis elegans
Exon39296   132   II: 615278-615409 Caenorhabditis elegans
Exon39300   240   II: 615998-616237 Caenorhabditis elegans
Exon39304   654   II: 616781-617434 Caenorhabditis elegans
Exon39308   98   II: 617588-617685 Caenorhabditis elegans
Exon39312   142   II: 617737-617878 Caenorhabditis elegans
Exon39316   253   II: 618071-618323 Caenorhabditis elegans
Exon39320   362   II: 618666-619027 Caenorhabditis elegans
Exon39324   104   II: 619484-619587 Caenorhabditis elegans
Exon39328   194   II: 619637-619830 Caenorhabditis elegans
Exon39332   135   II: 620438-620572 Caenorhabditis elegans
Exon39336   135   II: 620618-620752 Caenorhabditis elegans
Exon39338   103   II: 620807-620909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B8.5d.1 614953 620909 -1

1 Sequence

Length
2643

1 Sequence Ontology Term

Identifier Name Description
transcript