WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04B8.3a.1 Sequence Name  T04B8.3a.1
Length (nt)  1033   Chromosome Location  II: 627505-628658
Chromosome . Primary Identifier  II Chromosome Location . Start  627505
Chromosome Location . End  628658 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04B8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020205 arrd-1 T04B8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04B8.3a T04B8.3a 876   II: 627514-627717

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T04B8.3a.1 627505 628658 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39344   213   II: 627505-627717 Caenorhabditis elegans
Exon39345   258   II: 627765-628022 Caenorhabditis elegans
Exon39348   562   II: 628097-628658 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T04B8.3a.1 627505 628658 1

1 Sequence

Length
1033

1 Sequence Ontology Term

Identifier Name Description
transcript