WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02H6.2.1 Sequence Name  T02H6.2.1
Length (nt)  2006   Chromosome Location  II: 702107-708608
Chromosome . Primary Identifier  II Chromosome Location . Start  702107
Chromosome Location . End  708608 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02H6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020172 thoc-1 T02H6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02H6.2 T02H6.2 1998   II: 702115-702185

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02H6.2.1 702107 708608 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39510   79   II: 702107-702185 Caenorhabditis elegans
Exon39511   140   II: 702231-702370 Caenorhabditis elegans
Exon39512   119   II: 702416-702534 Caenorhabditis elegans
Exon39513   119   II: 702588-702706 Caenorhabditis elegans
Exon39514   79   II: 702770-702848 Caenorhabditis elegans
Exon39515   107   II: 702901-703007 Caenorhabditis elegans
Exon39516   109   II: 703372-703480 Caenorhabditis elegans
Exon39517   150   II: 703587-703736 Caenorhabditis elegans
Exon39518   110   II: 703906-704015 Caenorhabditis elegans
Exon39519   216   II: 704359-704574 Caenorhabditis elegans
Exon39520   111   II: 705635-705745 Caenorhabditis elegans
Exon39521   84   II: 705961-706044 Caenorhabditis elegans
Exon39522   157   II: 706165-706321 Caenorhabditis elegans
Exon39523   107   II: 706435-706541 Caenorhabditis elegans
Exon39524   319   II: 708290-708608 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02H6.2.1 702107 708608 1

1 Sequence

Length
2006

1 Sequence Ontology Term

Identifier Name Description
transcript