WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02H6.1b.1 Sequence Name  T02H6.1b.1
Length (nt)  1860   Chromosome Location  II: 709381-723699
Chromosome . Primary Identifier  II Chromosome Location . Start  709381
Chromosome Location . End  723699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02H6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020171 T02H6.1 T02H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02H6.1b T02H6.1b 1557   II: 709389-709457

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02H6.1b.1 709381 723699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39525   77   II: 709381-709457 Caenorhabditis elegans
Exon39526   102   II: 709506-709607 Caenorhabditis elegans
Exon39528   111   II: 709751-709861 Caenorhabditis elegans
Exon39529   137   II: 710062-710198 Caenorhabditis elegans
Exon39530   80   II: 711487-711566 Caenorhabditis elegans
Exon39531   164   II: 711613-711776 Caenorhabditis elegans
Exon39532   126   II: 712250-712375 Caenorhabditis elegans
Exon39533   156   II: 712561-712716 Caenorhabditis elegans
Exon39534   86   II: 712836-712921 Caenorhabditis elegans
Exon39535   119   II: 719409-719527 Caenorhabditis elegans
Exon39536   185   II: 719694-719878 Caenorhabditis elegans
Exon39537   223   II: 721116-721338 Caenorhabditis elegans
Exon39539   294   II: 723406-723699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02H6.1b.1 709381 723699 1

1 Sequence

Length
1860

1 Sequence Ontology Term

Identifier Name Description
transcript