WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08G5.2.1 Sequence Name  C08G5.2.1
Length (nt)  1023   Chromosome Location  II: 739553-740908
Chromosome . Primary Identifier  II Chromosome Location . Start  739553
Chromosome Location . End  740908 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08G5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015615 fbxc-48 C08G5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08G5.2 C08G5.2 501   II: 740014-740310

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08G5.2.1 739553 740908 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39564   758   II: 739553-740310 Caenorhabditis elegans
Exon39565   136   II: 740361-740496 Caenorhabditis elegans
Exon39566   129   II: 740780-740908 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08G5.2.1 739553 740908 -1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript