WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C08G5.4a Sequence Name  C08G5.4a
Length (nt)  1122   Chromosome Location  II: 745636-745952
Chromosome . Primary Identifier  II Chromosome Location . Start  745636
Chromosome Location . End  745952
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08G5.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34672 SNT-6, isoform a 42.5 373 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00040137
WBRNAi00010486
WBRNAi00028696
WBRNAi00112399

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C08G5.4a 745636 745952 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004926 snt-6 C08G5.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C08G5.4a 745636 745952 -1
CDS:C08G5.4a 746429 746543 -1
CDS:C08G5.4a 746592 746761 -1
CDS:C08G5.4a 749124 749240 -1
CDS:C08G5.4a 749447 749585 -1
CDS:C08G5.4a 749844 750009 -1
CDS:C08G5.4a 750067 750164 -1

1 Sequence

Length
1122

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C08G5.4a.1 C08G5.4a.1 1349   II: 745457-750212