WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08G5.7c.1 Sequence Name  C08G5.7c.1
Length (nt)  861   Chromosome Location  II: 756195-764852
Chromosome . Primary Identifier  II Chromosome Location . Start  756195
Chromosome Location . End  764852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08G5.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044418 C08G5.7 C08G5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08G5.7c C08G5.7c 300   II: 756403-756477

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08G5.7c.1 756195 764852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39603   283   II: 756195-756477 Caenorhabditis elegans
Exon39608   135   II: 756603-756737 Caenorhabditis elegans
Exon39613   126   II: 756793-756918 Caenorhabditis elegans
Exon39618   172   II: 762283-762454 Caenorhabditis elegans
Exon39621   145   II: 764708-764852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08G5.7c.1 756195 764852 -1

1 Sequence

Length
861

1 Sequence Ontology Term

Identifier Name Description
transcript