WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F5.1a.1 Sequence Name  F46F5.1a.1
Length (nt)  609   Chromosome Location  II: 790758-791636
Chromosome . Primary Identifier  II Chromosome Location . Start  790758
Chromosome Location . End  791636 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018493 F46F5.1 F46F5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F5.1a F46F5.1a 609   II: 790758-790955

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F5.1a.1 790758 791636 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39662   198   II: 790758-790955 Caenorhabditis elegans
Exon39663   134   II: 791004-791137 Caenorhabditis elegans
Exon39665   105   II: 791188-791292 Caenorhabditis elegans
Exon39668   172   II: 791465-791636 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F5.1a.1 790758 791636 -1

1 Sequence

Length
609

1 Sequence Ontology Term

Identifier Name Description
transcript