WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F5.10.1 Sequence Name  F46F5.10.1
Length (nt)  1110   Chromosome Location  II: 823829-825245
Chromosome . Primary Identifier  II Chromosome Location . Start  823829
Chromosome Location . End  825245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F5.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018501 F46F5.10 F46F5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F5.10 F46F5.10 1110   II: 823829-823906

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46F5.10.1 823829 825245 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39742   78   II: 823829-823906 Caenorhabditis elegans
Exon39743   214   II: 823950-824163 Caenorhabditis elegans
Exon39744   119   II: 824209-824327 Caenorhabditis elegans
Exon39745   180   II: 824374-824553 Caenorhabditis elegans
Exon39746   126   II: 824594-824719 Caenorhabditis elegans
Exon39747   61   II: 824762-824822 Caenorhabditis elegans
Exon39748   124   II: 824867-824990 Caenorhabditis elegans
Exon39749   208   II: 825038-825245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46F5.10.1 823829 825245 1

1 Sequence

Length
1110

1 Sequence Ontology Term

Identifier Name Description
transcript