WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28A10.6.1 Sequence Name  F28A10.6.1
Length (nt)  1340   Chromosome Location  II: 846864-848603
Chromosome . Primary Identifier  II Chromosome Location . Start  846864
Chromosome Location . End  848603 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28A10.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017874 acdh-9 F28A10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28A10.6 F28A10.6 1230   II: 846971-847144

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28A10.6.1 846864 848603 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39789   281   II: 846864-847144 Caenorhabditis elegans
Exon39790   103   II: 847190-847292 Caenorhabditis elegans
Exon39791   233   II: 847348-847580 Caenorhabditis elegans
Exon39792   163   II: 847689-847851 Caenorhabditis elegans
Exon39793   216   II: 847899-848114 Caenorhabditis elegans
Exon39794   173   II: 848159-848331 Caenorhabditis elegans
Exon39795   101   II: 848383-848483 Caenorhabditis elegans
Exon39796   70   II: 848534-848603 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28A10.6.1 846864 848603 -1

1 Sequence

Length
1340

1 Sequence Ontology Term

Identifier Name Description
transcript