WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46B2A.1.1 Sequence Name  Y46B2A.1.1
Length (nt)  1644   Chromosome Location  II: 868814-871699
Chromosome . Primary Identifier  II Chromosome Location . Start  868814
Chromosome Location . End  871699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46B2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021576 fbxc-51 Y46B2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46B2A.1 Y46B2A.1 1527   II: 868831-868898

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46B2A.1.1 868814 871699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39816   85   II: 868814-868898 Caenorhabditis elegans
Exon39817   386   II: 869252-869637 Caenorhabditis elegans
Exon39818   898   II: 869806-870703 Caenorhabditis elegans
Exon39819   275   II: 871425-871699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46B2A.1.1 868814 871699 1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
transcript