WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07D3.4a Sequence Name  T07D3.4a
Length (nt)  1230   Chromosome Location  II: 888452-888459
Chromosome . Primary Identifier  II Chromosome Location . Start  888452
Chromosome Location . End  888459
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE13361 T07D3.4, isoform a 48.6 409 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052752
WBRNAi00018361
WBRNAi00035302
WBRNAi00115898

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07D3.4a 888452 888459 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020307 T07D3.4 T07D3.4 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07D3.4a 888452 888459 1
CDS:T07D3.4a 888506 888665 1
CDS:T07D3.4a 888727 888852 1
CDS:T07D3.4a 888899 889026 1
CDS:T07D3.4a 889077 889203 1
CDS:T07D3.4a 889767 890015 1
CDS:T07D3.4a 890063 890189 1
CDS:T07D3.4a 890335 890444 1
CDS:T07D3.4a 890490 890684 1

1 Sequence

Length
1230

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07D3.4a.1 T07D3.4a.1 1399   II: 888309-890710