WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07C3.13a.1 Sequence Name  R07C3.13a.1
Length (nt)  762   Chromosome Location  II: 926494-927431
Chromosome . Primary Identifier  II Chromosome Location . Start  926494
Chromosome Location . End  927431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07C3.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019929 R07C3.13 R07C3.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07C3.13a R07C3.13a 525   II: 926751-926829

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07C3.13a.1 926494 927431 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon39941   188   II: 926494-926681 Caenorhabditis elegans
Exon39943   101   II: 926729-926829 Caenorhabditis elegans
Exon39945   164   II: 926874-927037 Caenorhabditis elegans
Exon39947   221   II: 927080-927300 Caenorhabditis elegans
Exon39950   88   II: 927344-927431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07C3.13a.1 926494 927431 -1

1 Sequence

Length
762

1 Sequence Ontology Term

Identifier Name Description
transcript