WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01D1.2.1 Sequence Name  M01D1.2.1
Length (nt)  1628   Chromosome Location  II: 1028972-1033665
Chromosome . Primary Identifier  II Chromosome Location . Start  1028972
Chromosome Location . End  1033665 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01D1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019699 math-34 M01D1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01D1.2 M01D1.2 1545   II: 1028987-1029087

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01D1.2.1 1028972 1033665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40154   116   II: 1028972-1029087 Caenorhabditis elegans
Exon40155   390   II: 1029212-1029601 Caenorhabditis elegans
Exon40156   149   II: 1030557-1030705 Caenorhabditis elegans
Exon40157   170   II: 1030749-1030918 Caenorhabditis elegans
Exon40158   108   II: 1031016-1031123 Caenorhabditis elegans
Exon40159   288   II: 1031180-1031467 Caenorhabditis elegans
Exon40161   58   II: 1033168-1033225 Caenorhabditis elegans
Exon40162   152   II: 1033270-1033421 Caenorhabditis elegans
Exon40163   197   II: 1033469-1033665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01D1.2.1 1028972 1033665 1

1 Sequence

Length
1628

1 Sequence Ontology Term

Identifier Name Description
transcript