WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T13B5.4 Sequence Name  T13B5.4
Length (nt)  909   Chromosome Location  II: 1105046-1105747
Chromosome . Primary Identifier  II Chromosome Location . Start  1105046
Chromosome Location . End  1105747
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13B5.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45752 COL-40 28.1 302 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00053246
WBRNAi00018662

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T13B5.4 1105046 1105747 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000617 col-40 T13B5.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T13B5.4 1105046 1105747 -1
CDS:T13B5.4 1106101 1106151 -1
CDS:T13B5.4 1106200 1106297 -1
CDS:T13B5.4 1106866 1106923 -1

1 Sequence

Length
909

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T13B5.4.1 T13B5.4.1 1054   II: 1104942-1106964