WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13B5.5.1 Sequence Name  T13B5.5.1
Length (nt)  876   Chromosome Location  II: 1108841-1111001
Chromosome . Primary Identifier  II Chromosome Location . Start  1108841
Chromosome Location . End  1111001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13B5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020472 lips-11 T13B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13B5.5 T13B5.5 867   II: 1108841-1108900

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.5.1 1108841 1111001 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40281   60   II: 1108841-1108900 Caenorhabditis elegans
Exon40282   112   II: 1108954-1109065 Caenorhabditis elegans
Exon40283   151   II: 1109426-1109576 Caenorhabditis elegans
Exon40284   356   II: 1109829-1110184 Caenorhabditis elegans
Exon40285   197   II: 1110805-1111001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.5.1 1108841 1111001 -1

1 Sequence

Length
876

1 Sequence Ontology Term

Identifier Name Description
transcript