WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13B5.6.1 Sequence Name  T13B5.6.1
Length (nt)  887   Chromosome Location  II: 1112184-1114233
Chromosome . Primary Identifier  II Chromosome Location . Start  1112184
Chromosome Location . End  1114233 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13B5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020473 lips-12 T13B5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13B5.6 T13B5.6 834   II: 1112230-1112292

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.6.1 1112184 1114233 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40286   109   II: 1112184-1112292 Caenorhabditis elegans
Exon40287   118   II: 1112346-1112463 Caenorhabditis elegans
Exon40288   109   II: 1112702-1112810 Caenorhabditis elegans
Exon40289   356   II: 1113150-1113505 Caenorhabditis elegans
Exon40290   195   II: 1114039-1114233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13B5.6.1 1112184 1114233 -1

1 Sequence

Length
887

1 Sequence Ontology Term

Identifier Name Description
transcript