WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F4.4.1 Sequence Name  T23F4.4.1
Length (nt)  1619   Chromosome Location  II: 1175925-1179323
Chromosome . Primary Identifier  II Chromosome Location . Start  1175925
Chromosome Location . End  1179323 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003545 nas-27 T23F4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F4.4 T23F4.4 1287   II: 1176072-1176207

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23F4.4.1 1175925 1179323 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40473   283   II: 1175925-1176207 Caenorhabditis elegans
Exon40474   119   II: 1176537-1176655 Caenorhabditis elegans
Exon40475   99   II: 1176921-1177019 Caenorhabditis elegans
Exon40476   167   II: 1177188-1177354 Caenorhabditis elegans
Exon40477   202   II: 1177546-1177747 Caenorhabditis elegans
Exon40478   326   II: 1178077-1178402 Caenorhabditis elegans
Exon40479   160   II: 1178847-1179006 Caenorhabditis elegans
Exon40480   263   II: 1179061-1179323 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23F4.4.1 1175925 1179323 -1

1 Sequence

Length
1619

1 Sequence Ontology Term

Identifier Name Description
transcript