WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A10.2d.1 Sequence Name  F53A10.2d.1
Length (nt)  2046   Chromosome Location  II: 1211123-1230465
Chromosome . Primary Identifier  II Chromosome Location . Start  1211123
Chromosome Location . End  1230465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A10.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018734 F53A10.2 F53A10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A10.2d F53A10.2d 2046   II: 1211123-1211173

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53A10.2d.1 1211123 1230465 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40486   51   II: 1211123-1211173 Caenorhabditis elegans
Exon40490   78   II: 1211355-1211432 Caenorhabditis elegans
Exon40498   99   II: 1225768-1225866 Caenorhabditis elegans
Exon40506   186   II: 1226111-1226296 Caenorhabditis elegans
Exon40515   420   II: 1227098-1227517 Caenorhabditis elegans
Exon40525   246   II: 1228270-1228515 Caenorhabditis elegans
Exon40535   545   II: 1228930-1229474 Caenorhabditis elegans
Exon40545   64   II: 1229646-1229709 Caenorhabditis elegans
Exon40555   215   II: 1229762-1229976 Caenorhabditis elegans
Exon40559   142   II: 1230324-1230465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53A10.2d.1 1211123 1230465 1

1 Sequence

Length
2046

1 Sequence Ontology Term

Identifier Name Description
transcript