WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G7A.10.1 Sequence Name  Y57G7A.10.1
Length (nt)  1065   Chromosome Location  II: 1302499-1306136
Chromosome . Primary Identifier  II Chromosome Location . Start  1302499
Chromosome Location . End  1306136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G7A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021973 emc-2 Y57G7A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G7A.10 Y57G7A.10 885   II: 1302662-1302742

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.10.1 1302499 1306136 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40718   244   II: 1302499-1302742 Caenorhabditis elegans
Exon40719   105   II: 1302894-1302998 Caenorhabditis elegans
Exon40720   96   II: 1303055-1303150 Caenorhabditis elegans
Exon40721   159   II: 1304845-1305003 Caenorhabditis elegans
Exon40722   84   II: 1305056-1305139 Caenorhabditis elegans
Exon40723   189   II: 1305196-1305384 Caenorhabditis elegans
Exon40725   134   II: 1305896-1306029 Caenorhabditis elegans
Exon40726   54   II: 1306083-1306136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G7A.10.1 1302499 1306136 -1

1 Sequence

Length
1065

1 Sequence Ontology Term

Identifier Name Description
transcript