WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D12.4a.1 Sequence Name  F56D12.4a.1
Length (nt)  3103   Chromosome Location  II: 1326995-1350126
Chromosome . Primary Identifier  II Chromosome Location . Start  1326995
Chromosome Location . End  1350126 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002176 jip-1 F56D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D12.4a F56D12.4a 3006   II: 1327001-1327096

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.4a.1 1326995 1350126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40795   102   II: 1326995-1327096 Caenorhabditis elegans
Exon40797   213   II: 1327837-1328049 Caenorhabditis elegans
Exon40799   161   II: 1328667-1328827 Caenorhabditis elegans
Exon40801   158   II: 1329414-1329571 Caenorhabditis elegans
Exon40803   165   II: 1330324-1330488 Caenorhabditis elegans
Exon40805   108   II: 1331052-1331159 Caenorhabditis elegans
Exon40807   194   II: 1331243-1331436 Caenorhabditis elegans
Exon40810   299   II: 1332372-1332670 Caenorhabditis elegans
Exon40815   197   II: 1337065-1337261 Caenorhabditis elegans
Exon40819   280   II: 1337393-1337672 Caenorhabditis elegans
Exon40823   125   II: 1339686-1339810 Caenorhabditis elegans
Exon40830   267   II: 1346070-1346336 Caenorhabditis elegans
Exon40836   97   II: 1347314-1347410 Caenorhabditis elegans
Exon40842   77   II: 1347471-1347547 Caenorhabditis elegans
Exon40848   108   II: 1347596-1347703 Caenorhabditis elegans
Exon40854   209   II: 1348497-1348705 Caenorhabditis elegans
Exon40862   80   II: 1349481-1349560 Caenorhabditis elegans
Exon40868   99   II: 1349617-1349715 Caenorhabditis elegans
Exon40878   164   II: 1349963-1350126 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.4a.1 1326995 1350126 1

1 Sequence

Length
3103

1 Sequence Ontology Term

Identifier Name Description
transcript