WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56D12.4b.1 Sequence Name  F56D12.4b.1
Length (nt)  1640   Chromosome Location  II: 1337093-1350106
Chromosome . Primary Identifier  II Chromosome Location . Start  1337093
Chromosome Location . End  1350106 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56D12.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002176 jip-1 F56D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D12.4b F56D12.4b 1569   II: 1337093-1337261

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.4b.1 1337093 1350106 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40818   169   II: 1337093-1337261 Caenorhabditis elegans
Exon40820   280   II: 1337393-1337672 Caenorhabditis elegans
Exon40824   125   II: 1339686-1339810 Caenorhabditis elegans
Exon40831   267   II: 1346070-1346336 Caenorhabditis elegans
Exon40839   82   II: 1347329-1347410 Caenorhabditis elegans
Exon40843   77   II: 1347471-1347547 Caenorhabditis elegans
Exon40849   108   II: 1347596-1347703 Caenorhabditis elegans
Exon40855   209   II: 1348497-1348705 Caenorhabditis elegans
Exon40863   80   II: 1349481-1349560 Caenorhabditis elegans
Exon40869   99   II: 1349617-1349715 Caenorhabditis elegans
Exon40877   144   II: 1349963-1350106 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56D12.4b.1 1337093 1350106 1

1 Sequence

Length
1640

1 Sequence Ontology Term

Identifier Name Description
transcript