WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13A10.1a.1 Sequence Name  C13A10.1a.1
Length (nt)  1652   Chromosome Location  II: 1350656-1355649
Chromosome . Primary Identifier  II Chromosome Location . Start  1350656
Chromosome Location . End  1355649 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13A10.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015728 C13A10.1 C13A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13A10.1a C13A10.1a 1434   II: 1350775-1351054

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13A10.1a.1 1350656 1355649 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon40881   399   II: 1350656-1351054 Caenorhabditis elegans
Exon40883   805   II: 1351976-1352780 Caenorhabditis elegans
Exon40886   141   II: 1353959-1354099 Caenorhabditis elegans
Exon40889   124   II: 1354172-1354295 Caenorhabditis elegans
Exon40892   100   II: 1355407-1355506 Caenorhabditis elegans
Exon40896   83   II: 1355567-1355649 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13A10.1a.1 1350656 1355649 -1

1 Sequence

Length
1652

1 Sequence Ontology Term

Identifier Name Description
transcript