WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H17B01.1a Sequence Name  H17B01.1a
Length (nt)  1479   Chromosome Location  II: 1504568-1504630
Chromosome . Primary Identifier  II Chromosome Location . Start  1504568
Chromosome Location . End  1504630
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H17B01.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27184 FDGT-1, isoform a 53.3 492 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00049420
WBRNAi00016274
WBRNAi00020898
WBRNAi00092807
WBRNAi00037371
WBRNAi00112221
WBRNAi00112261
WBRNAi00092805
WBRNAi00112262
WBRNAi00112222
WBRNAi00092806

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H17B01.1a 1504568 1504630 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019207 fdgt-1 H17B01.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:H17B01.1a 1504568 1504630 1
CDS:H17B01.1a 1504926 1505024 1
CDS:H17B01.1a 1505706 1505785 1
CDS:H17B01.1a 1505882 1506087 1
CDS:H17B01.1a 1506550 1506784 1
CDS:H17B01.1a 1507069 1507225 1
CDS:H17B01.1a 1508352 1508660 1
CDS:H17B01.1a 1508739 1508930 1
CDS:H17B01.1a 1509550 1509687 1

1 Sequence

Length
1479

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H17B01.1a.1 H17B01.1a.1 1625   II: 1504566-1509831