WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H3.5.1 Sequence Name  T07H3.5.1
Length (nt)  1254   Chromosome Location  II: 1593480-1595237
Chromosome . Primary Identifier  II Chromosome Location . Start  1593480
Chromosome Location . End  1595237 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020328 clec-20 T07H3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H3.5 T07H3.5 1254   II: 1593480-1594279

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H3.5.1 1593480 1595237 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41279   800   II: 1593480-1594279 Caenorhabditis elegans
Exon41280   259   II: 1594733-1594991 Caenorhabditis elegans
Exon41281   195   II: 1595043-1595237 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H3.5.1 1593480 1595237 -1

1 Sequence

Length
1254

1 Sequence Ontology Term

Identifier Name Description
transcript