WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58E1.6b.1 Sequence Name  F58E1.6b.1
Length (nt)  2001   Chromosome Location  II: 1670829-1674401
Chromosome . Primary Identifier  II Chromosome Location . Start  1670829
Chromosome Location . End  1674401 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58E1.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003734 nhx-6 F58E1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58E1.6b F58E1.6b 1905   II: 1670861-1671056

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58E1.6b.1 1670829 1674401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41410   228   II: 1670829-1671056 Caenorhabditis elegans
Exon41413   267   II: 1672182-1672448 Caenorhabditis elegans
Exon41415   134   II: 1672521-1672654 Caenorhabditis elegans
Exon41417   326   II: 1672697-1673022 Caenorhabditis elegans
Exon41419   274   II: 1673067-1673340 Caenorhabditis elegans
Exon41421   144   II: 1673388-1673531 Caenorhabditis elegans
Exon41423   90   II: 1673578-1673667 Caenorhabditis elegans
Exon41424   168   II: 1673719-1673886 Caenorhabditis elegans
Exon41426   370   II: 1674032-1674401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58E1.6b.1 1670829 1674401 1

1 Sequence

Length
2001

1 Sequence Ontology Term

Identifier Name Description
transcript