WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45C12.4.1 Sequence Name  F45C12.4.1
Length (nt)  1031   Chromosome Location  II: 1728506-1730065
Chromosome . Primary Identifier  II Chromosome Location . Start  1728506
Chromosome Location . End  1730065 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45C12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018435 btb-9 F45C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45C12.4 F45C12.4 876   II: 1728573-1728667

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45C12.4.1 1728506 1730065 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41508   162   II: 1728506-1728667 Caenorhabditis elegans
Exon41509   352   II: 1728741-1729092 Caenorhabditis elegans
Exon41510   145   II: 1729504-1729648 Caenorhabditis elegans
Exon41511   372   II: 1729694-1730065 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45C12.4.1 1728506 1730065 1

1 Sequence

Length
1031

1 Sequence Ontology Term

Identifier Name Description
transcript