WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45C12.15.2 Sequence Name  F45C12.15.2
Length (nt)  1835   Chromosome Location  II: 1733716-1736533
Chromosome . Primary Identifier  II Chromosome Location . Start  1733716
Chromosome Location . End  1736533 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45C12.15.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018446 ceh-83 F45C12.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45C12.15 F45C12.15 1632   II: 1733854-1733967

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45C12.15.2 1733716 1736533 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41528   252   II: 1733716-1733967 Caenorhabditis elegans
Exon41531   183   II: 1734013-1734195 Caenorhabditis elegans
Exon41533   189   II: 1734250-1734438 Caenorhabditis elegans
Exon41535   126   II: 1734486-1734611 Caenorhabditis elegans
Exon41537   261   II: 1734831-1735091 Caenorhabditis elegans
Exon41539   381   II: 1735141-1735521 Caenorhabditis elegans
Exon41541   156   II: 1735566-1735721 Caenorhabditis elegans
Exon41543   153   II: 1735774-1735926 Caenorhabditis elegans
Exon41545   89   II: 1736355-1736443 Caenorhabditis elegans
Exon41546   45   II: 1736489-1736533 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45C12.15.2 1733716 1736533 -1

1 Sequence

Length
1835

1 Sequence Ontology Term

Identifier Name Description
transcript