WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45C12.16.1 Sequence Name  F45C12.16.1
Length (nt)  1581   Chromosome Location  II: 1736806-1738944
Chromosome . Primary Identifier  II Chromosome Location . Start  1736806
Chromosome Location . End  1738944 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45C12.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018447 irld-9 F45C12.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45C12.16 F45C12.16 1521   II: 1736866-1736942

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45C12.16.1 1736806 1738944 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41540   137   II: 1736806-1736942 Caenorhabditis elegans
Exon41541   124   II: 1736991-1737114 Caenorhabditis elegans
Exon41542   474   II: 1737163-1737636 Caenorhabditis elegans
Exon41543   497   II: 1737689-1738185 Caenorhabditis elegans
Exon41544   255   II: 1738547-1738801 Caenorhabditis elegans
Exon41545   94   II: 1738851-1738944 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45C12.16.1 1736806 1738944 -1

1 Sequence

Length
1581

1 Sequence Ontology Term

Identifier Name Description
transcript