WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36H5.1.1 Sequence Name  F36H5.1.1
Length (nt)  2569   Chromosome Location  II: 1771647-1774942
Chromosome . Primary Identifier  II Chromosome Location . Start  1771647
Chromosome Location . End  1774942 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36H5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018100 math-26 F36H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36H5.1 F36H5.1 2466   II: 1771654-1771766

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36H5.1.1 1771647 1774942 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41632   120   II: 1771647-1771766 Caenorhabditis elegans
Exon41633   296   II: 1771809-1772104 Caenorhabditis elegans
Exon41635   115   II: 1772147-1772261 Caenorhabditis elegans
Exon41636   269   II: 1772449-1772717 Caenorhabditis elegans
Exon41637   127   II: 1772767-1772893 Caenorhabditis elegans
Exon41638   345   II: 1772937-1773281 Caenorhabditis elegans
Exon41639   99   II: 1773327-1773425 Caenorhabditis elegans
Exon41640   281   II: 1773481-1773761 Caenorhabditis elegans
Exon41641   127   II: 1773828-1773954 Caenorhabditis elegans
Exon41642   278   II: 1774001-1774278 Caenorhabditis elegans
Exon41643   112   II: 1774332-1774443 Caenorhabditis elegans
Exon41644   400   II: 1774543-1774942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36H5.1.1 1771647 1774942 1

1 Sequence

Length
2569

1 Sequence Ontology Term

Identifier Name Description
transcript