WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08E11.4.1 Sequence Name  T08E11.4.1
Length (nt)  2330   Chromosome Location  II: 1824629-1830228
Chromosome . Primary Identifier  II Chromosome Location . Start  1824629
Chromosome Location . End  1830228 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08E11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020360 math-41 T08E11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08E11.4 T08E11.4 2115   II: 1824640-1824709

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08E11.4.1 1824629 1830228 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41744   81   II: 1824629-1824709 Caenorhabditis elegans
Exon41745   999   II: 1824761-1825759 Caenorhabditis elegans
Exon41746   138   II: 1825810-1825947 Caenorhabditis elegans
Exon41747   121   II: 1828929-1829049 Caenorhabditis elegans
Exon41748   275   II: 1829097-1829371 Caenorhabditis elegans
Exon41749   127   II: 1829466-1829592 Caenorhabditis elegans
Exon41750   589   II: 1829640-1830228 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08E11.4.1 1824629 1830228 1

1 Sequence

Length
2330

1 Sequence Ontology Term

Identifier Name Description
transcript