WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E2.3.1 Sequence Name  C52E2.3.1
Length (nt)  1014   Chromosome Location  II: 1851244-1852861
Chromosome . Primary Identifier  II Chromosome Location . Start  1851244
Chromosome Location . End  1852861 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016882 C52E2.3 C52E2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E2.3 C52E2.3 636   II: 1851244-1851438

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C52E2.3.1 1851244 1852861 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41787   195   II: 1851244-1851438 Caenorhabditis elegans
Exon41788   46   II: 1851502-1851547 Caenorhabditis elegans
Exon41789   57   II: 1851592-1851648 Caenorhabditis elegans
Exon41790   134   II: 1852101-1852234 Caenorhabditis elegans
Exon41791   582   II: 1852280-1852861 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C52E2.3.1 1851244 1852861 1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
transcript