WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C6.8.1 Sequence Name  F52C6.8.1
Length (nt)  1016   Chromosome Location  II: 1916713-1917962
Chromosome . Primary Identifier  II Chromosome Location . Start  1916713
Chromosome Location . End  1917962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C6.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018665 bath-4 F52C6.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C6.8 F52C6.8 921   II: 1916798-1916920

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52C6.8.1 1916713 1917962 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon41913   208   II: 1916713-1916920 Caenorhabditis elegans
Exon41914   152   II: 1916982-1917133 Caenorhabditis elegans
Exon41915   148   II: 1917195-1917342 Caenorhabditis elegans
Exon41916   385   II: 1917399-1917783 Caenorhabditis elegans
Exon41917   123   II: 1917840-1917962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52C6.8.1 1916713 1917962 -1

1 Sequence

Length
1016

1 Sequence Ontology Term

Identifier Name Description
transcript